Query   'TRAF-like domain'  matched   9 Records

Record No : 1

Instance ID10916
Regular ExpressionxPxAxVxP[^P]
Motif InstanceAPTAVVLPH
Bait Uniprot AccessionQ16633
Bait Uniprot IdentifierOBF1_HUMAN
Bait Gene NamePOU2AF1
Bait OrganismHomo sapiens (Human)
Sequence Position46-54
Critical ResiduesUnknown
Motif PTM(s)Unknown
Secondary StructureUnknown
Experimental Method(s)Pull down(GST tag); Mammalian two-hybrid assay; Classical fluorescence spectroscopy
Interaction ID20916
Interacting DomainTRAF-like domain
Disease Association(s)Unknown
Inhibitor(s)Unknown
Reference(s)11483518
CommentsThe PxAxVxP motif in human B-cell-specific coactivator OBF-1/BOB-1 (POU2AF1) that confer a high-affinity binding to human E3 ubiquitin-protein ligase SIAH1

Record No : 2

Instance ID10917
Regular ExpressionxPxAxVxP[^P]
Motif InstanceAPTAVVLPH
Bait Uniprot AccessionQ16633
Bait Uniprot IdentifierOBF1_HUMAN
Bait Gene NamePOU2AF1
Bait OrganismHomo sapiens (Human)
Sequence Position46-54
Critical ResiduesUnknown
Motif PTM(s)Unknown
Secondary StructureUnknown
Experimental Method(s)Pull down(GST tag); Mammalian two-hybrid assay; Classical fluorescence spectroscopy
Interaction ID20917
Interacting DomainTRAF-like domain
Disease Association(s)Unknown
Inhibitor(s)Unknown
Reference(s)11483518
CommentsThe PxAxVxP motif in human B-cell-specific coactivator OBF-1/BOB-1 (POU2AF1) that confer a high-affinity binding to human E3 ubiquitin-protein ligase SIAH2

Record No : 3

Instance ID10918
Regular ExpressionxPxAxVxP[^P]
Motif InstanceIPTACVRPT
Bait Uniprot AccessionP43146
Bait Uniprot IdentifierDCC_HUMAN
Bait Gene NameDCC
Bait OrganismHomo sapiens (Human)
Sequence Position1331-1339
Critical ResiduesUnknown
Motif PTM(s)Unknown
Secondary StructureUnknown
Experimental Method(s)Classical fluorescence spectroscopy
Interaction ID20918
Interacting DomainTRAF-like domain
Disease Association(s)Unknown
Inhibitor(s)Unknown
Reference(s)9334332
CommentsThe PxAxVxP motif in human Netrin receptor DCC that confer binding to mouse E3 ubiquitin-protein ligase Siah2

Record No : 4

Instance ID10919
Regular ExpressionxPxAxVxP[^P]
Motif InstanceKPTAYVRPM
Bait Uniprot AccessionQ9UHB7
Bait Uniprot IdentifierAFF4_HUMAN
Bait Gene NameAFF4
Bait OrganismHomo sapiens (Human)
Sequence Position252-260
Critical ResiduesP6
Motif PTM(s)Unknown
Secondary StructureUnknown
Experimental Method(s)Mutation analysis; Co-IP
Interaction ID20919
Interacting DomainTRAF-like domain
Disease Association(s)Unknown
Inhibitor(s)Unknown
Reference(s)15459319
CommentsThe PxAxVxP motif in human AFF4 that mediates binding to and degradation by human E3 ubiquitin-protein ligase SIAH1

Record No : 5

Instance ID10920
Regular ExpressionxPxAxVxP[^P]
Motif InstanceKPAAVVAPI
Bait Uniprot AccessionQ9HB71
Bait Uniprot IdentifierCYBP_HUMAN
Bait Gene NameCACYBP
Bait OrganismHomo sapiens (Human)
Sequence Position59-67
Critical ResiduesUnknown
Motif PTM(s)Unknown
Secondary StructureUnknown
Experimental Method(s)X-ray crystallography; Y2H; Co-IP
Interaction ID20920
Interacting DomainTRAF-like domain
Disease Association(s)Unknown
Inhibitor(s)Unknown
Reference(s)16085652, 11389839
CommentsThe PxAxVxP motif in human Calcyclin-binding protein (CACYBP)/Siah-interacting protein that mediates binding to and degradation by human E3 ubiquitin-protein ligase SIAH1

Record No : 6

Instance ID10921
Regular ExpressionxPxAxVxP[^P]
Motif InstanceRPVAMVRPT
Bait Uniprot AccessionQ27934
Bait Uniprot IdentifierPHYL_DROME
Bait Gene Namephyl
Bait OrganismDrosophila melanogaster (Fruit fly)
Sequence Position115-123
Critical ResiduesP6; P8
Motif PTM(s)Unknown
Secondary StructureUnknown
Experimental Method(s)X-ray crystallography; Mutation analysis; Co-IP; Pull down
Interaction ID20921
Interacting DomainTRAF-like domain
Disease Association(s)Unknown
Inhibitor(s)Unknown
Reference(s)16615911, 12626763
CommentsThe PxAxVxP motif in Drosophila Phyllopod (phyl) protein that mediates binding to mouse E3 ubiquitin-protein ligase Siah1a

Record No : 7

Instance ID10922
Regular ExpressionxPxAxVxP[^P]
Motif InstanceIPCAAVSPN
Bait Uniprot AccessionQ13118
Bait Uniprot IdentifierKLF10_HUMAN
Bait Gene NameKLF10
Bait OrganismHomo sapiens (Human)
Sequence Position200-208
Critical ResiduesUnknown
Motif PTM(s)Unknown
Secondary StructureUnknown
Experimental Method(s)Y2H
Interaction ID20922
Interacting DomainTRAF-like domain
Disease Association(s)Unknown
Inhibitor(s)Unknown
Reference(s)12072443
CommentsHuman Transforming growth factor beta (TGFbeta)-inducible early gene-1 (TIEG1)/ Krüppel-like transcription factor 10 (KLF10) and E3 ubiquitin ligase Seven in Absentia homologue-1 (SIAH1) interact through the PxAxVxP motif of TIEG1

Record No : 8

Instance ID10923
Regular ExpressionxPxAxVxP[^P]
Motif InstancePPRALVLPH
Bait Uniprot AccessionQ86TG7
Bait Uniprot IdentifierPEG10_HUMAN
Bait Gene NamePEG10
Bait OrganismHomo sapiens (Human)
Sequence Position253-261
Critical ResiduesUnknown
Motif PTM(s)Unknown
Secondary StructureUnknown
Experimental Method(s)Y2H; Co-IP
Interaction ID20923
Interacting DomainTRAF-like domain
Disease Association(s)Cancer
Inhibitor(s)Unknown
Reference(s)12810624
CommentsHuman Retrotransposon-derived protein PEG10 (paternally expressed gene 10) associates with human E3 ubiquitin-protein ligase SIAH1, a mediator of apoptosis, and overexpression of PEG10 decreases the cell death mediated by SIAH1

Record No : 9

Instance ID10924
Regular ExpressionxPxAxVxP[^P]
Motif InstanceRPTAAVTPI
Bait Uniprot AccessionQ7Z6J0
Bait Uniprot IdentifierSH3R1_HUMAN
Bait Gene NameSH3RF1
Bait OrganismHomo sapiens (Human)
Sequence Position600-608
Critical ResiduesUnknown
Motif PTM(s)Unknown
Secondary StructureUnknown
Experimental Method(s)Y2H; Co-IP
Interaction ID20924
Interacting DomainTRAF-like domain
Disease Association(s)Unknown
Inhibitor(s)Unknown
Reference(s)16230351
CommentsHuman E3 ubiquitin-protein ligase SIAH1 is a binding partner for E3 ubiquitin-protein ligase SH3RF1/ POSH (Plenty of SH3s), a scaffold component of the apoptotic JNK pathway, and thus contributes to promotion of apoptotic death by activating the JNK pathway




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For queries, suggestions and submission of novel motifs please contact Dr. Sudipto Saha (ssaha4@jcbose.ac.in)